UPDATE: Waiting on the part from Lotus, so I bought a marine grade SS screw and nut. They were 8-32 or 10-32 thread. It is there just to prevent the butterfly valve from sticking. The tolerances are very tight, and the spring is pretty strong. Without the stop screw the butterfly flap can slap shut and catch the edge of the opening - jamming it in place. Depending on your assembly tolerances and how smoothly machined the lip on your supercharger is it may or may not be a problem. Although, constant slamming even without jamming could cause excessive wear and not allow the valve to properly seal, leading to lost boost/power. If it does get jammed shut, you are running on constant boost which is not good long term for your engine and SC.
I recommend for anyone missing the screw to contact your dealer ASAP to get it fixed. If you are mechanically inclined, you can get a screw and nut from your local hardware store and install them. You can feel the valve shut when you flip the lever arm manually. I set the screw a 1/4 to a 1/2 turn past that, just to keep it from sticking. If the dealer gives me any info on the proper calibration of this I will share here.